The version that is out there for download is the same version that everyone has been using without problems with SHOstock3.
Possible issues you might have could be resolved by trying the following:
Make sure that the Theme says it is done flashing before backing out of CWM
I takes about 2 minutes to flash the theme.
Re-download the theme,
try TLime and see if it has the same issues.
Currently the only part of the theme that might not change is the Multi-Window Bar.
Other possible but unlikely might be:
The SHOstock3 rom was not installed completely, redownload the SHOstock3 Rom and reflash.
Hope that helps.