The version of stock makes no difference on installing CM. I recommend you install CM10.1 per the directions in the dummies guide linked in my signature.
Sent from my BN NookHD+ using XDA Premium HD app
See my Nook Color Tips Thread here
and my Nook Color EMMC Partition Repair Thread here
and my Nook Color Updated CM SD Installation Instructions here
and my Nook HD/HD+ stock tips thread here
and my Nook HD/HD+ CWM Root Tools thread here
e.mote's Nook HD/HD+ Dummies Guide for installing CM10.1/CM10.2/CM11 here