I tried the VNC version out after Dahweiteh's recommendation, and it works great. Only flaw I found with it is the page up and page down don't work... but home and end do. (Strange, with how it is implimented, isn't it?)
Search also doesn't do anything, but the only time we can hit it is with the keyboard dock. I'd have loved to also remap it to Alt, or the missing Super key. This is still the best remote app I've tried with the transformer -- right clicking is huge!
Oh, yeah -- and middle clicking does not work, but is detected; it runs a menu popup when you chord.
*edit* Found out that the volume keys send Pageup and Pagedown, even if the real pageup and pagedown don't work. Needless to say, no multi-finger scrolling -- it doesn't crash like in Splashtop, but it just reverses the mouse and drags up.
*edit 2* I just got a reply back from the App author, too, saying he was going to add page up and down, middle click on menu, and the ability to configure search... wow, quick!