Maybe a slightly naive question......but I obviously need to downgrade my HBOOT to achieve S-OFF on the phone via the Rev method.
Can I restore my HBOOT version back to 2.00.0002 without running another RUU through it or is there another method.
My MIUI ROM works OK under 2.00.0002 should expect problems if it it runs under an earlier version ?
It's been awhile since I've S-OFFed my phone, so my information may not be correct; please be careful!
If I remember correctly it's not possible to flash a HBOOT image from a rooted rom if you are S-ON (since that's the sense behind S-ON). However you could try it. If it prevents flashing to the HBOOT partition ("permission denied" or something similar), your device will not be tainted; but as always: There is a possible risk of bricking the device. For information about flashing HBOOT image from a running rooted device see http://xdaforums.com/showthread.php?t=1186401: "How to: Upgrade to new HBOOT version 2.00.2002 / Downgrade to old HBOOT" (without steps 1 & 9). Of course you need to flash a revolutionary compatible HBOOT image (not 2.00.0002 as mentioned in the guide): The attachment in this thread contains two HBOOT versions as images, "hboot_0.98.0000_361a7ba6_0310.img" is what you need. After confirming your device is running "0.98.2000 (PG8810000)" you are ready to try revolutionary.
If this doesn't work the only way to downgrade is running an RUU which will delete all of your data, but restoring an NANDROID backup is fairly easy to get your data back.
To your second question: HBOOT should not have any influence on the ROM (never 100% guarantee though).