It seems cyttsp_fwloader has auto-calibration itself, so I poked the file and finally my phone is fixed now. Hopefully anyone who has the issue could use this method, too.
This script is written by GScript Lite, or maybe you could use this as a shell script. In both cases, you need a root access to run this script.
cyttsp_fwloader -dev $dev -fw /system/etc/firmware/$fw -verify_only
Your phone will shutdown by running this script, and after powering-on, your phone should be fixed.
Note (as usual): I don't have any responsible for this script, so use at your own risk!